IEAP - Institute of Experimental and Applied Physics

Grants > Research center "Fabrication, modification and characterization of materials by energetic radiation"

Research center "Fabrication, modification and characterization of materials by energetic radiation"

The project concentrates technical and personal capacities of participants with the aim to achieve higher quality and effectivity of experimental an theoretical research in the following main fields: - effects of energetic radiation on structure and properties of materials and their potential usage for preparation of new materials with outstanding electrical, optical and biological properties - development of techniques for preparation of nano- and micro- structured materials with potential applications in electronics, optoelectronics and medicine -development of new techniques for complex characterization of materials, especially those which are still unavailable in CR, including development of detectors with high spatial and energetic resolution (Medipix).

Since the project is supported by czech ministry of education youht and sports, the documentation is held in czech language.

number

LC06041

duration

1.4.2006 - 30.12.2011

coordinator

Hnatowicz Vladimír

NPI ASCR

responsible person

Jakůbek Jan

IEAP

team members

Platkevič Michal	IEAP
Vavřík Daniel	IEAP
Vykydal Zdeněk	IEAP
Slavíček Tomáš	IEAP
Pospíšil Stanislav	IEAP
Soukup Pavel	IEAP

Articles in Impacted Journals
(65)

Articles in Conference Proceedings
(45)

Thesis
(4)

Other publications
(7)

All
(122)

Table format

L. Opalka, C. Granja, B. Hartmann, J. Jakůbek, O. Jaekel, M. Martisikova, S. Pospíšil, J. Solc, "3D measurement of the radiation distribution in a water phantom in a hadron therapy beam", J.of Instrumentation 7 (2012) C01085

F. Krejčí, M. Kroupa, J. Jakůbek, P. Brůža, D. Pánek, "Detection of Soft X-rays with the Pixel Detector Timepix operated as a highly sensitive Dark-Current free CCD-like Camera ", 2011 IEEE Nuclear Science Symposium Conference Record, NP5.S-166, 1708 - 1712 (2012)

J. Žemlička, J. Jakůbek, F. Krejčí, D. Hradil, J. Hradilová, H. Mislerová, "Mobile system for in-situ imaging of cultural objects", Journal of Instrumentation 7 C01108 (2012)

M. Jakůbek, J. Jakůbek, J. Žemlička, M. Kroupa, F. Krejčí, "Probe and scanning system for 3D response mapping of pixelated semiconductor detector with X-rays and the timepix device", AIP Conf. Proc. 1423, pp. 461-466; doi:10.1063/1.3688846 (2012)

P. Soukup, J. Jakůbek, Z. Vykydal, "3D sensitive voxel detector of ionizing radiation based on Timepix device", Journal of Instrumentation 6 C01060, doi: 10.1088/1748-0221/6/01/C01060 (2011)

J. Jakůbek, "Absorption and Phase X-ray Imaging Using Reflected Beam", NIM A, 633-1, S172-S174, doi:10.1016/j.nima.2010.06.158 (2011)

M. Platkevič, J. Jakůbek, Z. Vykydal, C. Granja, "Analogue signal from common electrode of pixelated detector for triggering and spectroscopy ", Journal of Instrumentation 6 C11023 doi:10.1088/1748-0221/6/11/C11023 (2011)

J. Žemlička, J. Jakůbek, M. Kroupa, D. Hradil, J. Hradilová, H. Mislerová, "Analysis of painted arts by energy sensitive radiographic techniques with the Pixel Detector Timepix", Journal of Instrumentation 6 C01066, doi: 10.1088/1748-0221/6/01/C01066 (2011)

L. Pinsky, N. Stoffle, J. Jakůbek, S. Pospíšil, C. Leroy, A. Gutierrez, H. , N. Yasuda, Y. Uchihori, "Application of the Medipix2 technology to space radiation dosimetry and hadron therapy beam monitoring ", Nucl. Instr. Methods A, Volume 628, Issue 1, Pages 226-229, doi:10.1016/j.nima.2010.06.323 (2011)

M. Platkevič, P. Čermák, J. Jakůbek, S. Pospíšil, I. Štekl, Z. Vykydal, J. Žemlička, C. Leroy, P. Allard, G. Bergeron, P. Soueid, C. Teyssier, R. Yapoudjian, M. Fiederle, A. Fauler, G. Chelkov, O. Toblanov, A. Tyazhev, J. Visser, "Characterization of Charge Collection in Various Semiconductor Sensors with Energetic Protons and Timepix Device", 2011 IEEE Nuclear Science Symposium Conference Record, Pages: 4715 - 4719, doi: 10.1109/NSSMIC.2011.6154765

M. Kroupa, J. Jakůbek, F. Krejčí, J. Žemlička, M. Horáček, T. Radlička, I. Vlček, "Coincidence Imaging System with Electron Optics", Nucl. Instr. Methods A 633, Suppl. 1, S270-S273 (2011)

Z. Vykydal, A. Fauler, M. Fiederle, J. Jakůbek, P. Soukup, A. Fauler, "Combined Medipix based imaging system with Si and CdTe sensor", 2011 IEEE Nuclear Science Symposium Conference Record, Pages: 4761 - 4765, doi: 10.1109/NSSMIC.2011.6154710

J. Jakůbek, M. Platkevič, C. Granja, U. Koester, S. Pospíšil, "Direct Observation of Decay of Radioactive Nuclei with Spatial and Time Coincidence Technique", Nucl. Instr. Methods A 633 (2011) S203-S205

M. Esposito, J. Jakůbek, G. Mettivier, S. Pospíšil, P. Russo, J. Šolc, "Energy sensitive Timepix silicon detector for electron imaging", NIM A, Vol. 652, Issue 1, 458-461, doi:10.1016/j.nima.2011.01.148

O. Jiroušek, I. Jandejsek, D. Vavřík, "Evaluation of strain field in microstructures using micro-CT and digital volume correlation", JINST 6 C01039 doi:10.1088/1748-0221/6/01/C01039 (2011)

V. Kraus, M. Holík, J. Jakůbek, M. Kroupa, P. Soukup, Z. Vykydal, "FITPix – Fast Interface for Timepix Pixel Detectors", Journal of Instrumentation 6 C01079, doi: 10.1088/1748-0221/6/01/C01079 (2011)

I. Jandejsek, P. Soukup, J. Jakůbek, "Image processing for X-ray transmission radiography with 3D voxel detector", JINST 6 C12061 doi:10.1088/1748-0221/6/12/C12061 (2011)

J. Jakůbek, C. Granja, B. Hartmann, O. Jaekel, M. Martisikova, L. Opalka, S. Pospíšil, "Imaging with Secondary Radiation in Hadron Therapy Beams with the 3D Sensitive Voxel Detector", IEEE NSS/MIC/RTSD Valencia, Conf. Record (2011) 2281-2284

M. Holík, V. Kraus, C. Granja, J. Jakůbek, V. Georgiev, M. Hromadka, J. Skala, Z. Kubik, "Influence of electromagnetic interference on the analog part of hybrid Pixel detectors", JINST 6 C12028, doi:10.1088/1748-0221/6/12/C12028 (2011)

J. Urbář, J. Scheirich, J. Jakůbek, "MEDIPIX/TIMEPIX cosmic ray tracking on BEXUS stratospheric balloon flights", Nucl. Instr. Methods A, Vol. 633, Suppl. 1, p. S206-S209, doi:10.1016/j.nima.2010.06.168 (2011)

J. Bouchami, A. Gutierrez, T. Holý, A. Houdayer, J. Jakůbek, C. Lebel, C. Leroy, J. Macana, J. Martin, S. Pospíšil, S. Prak, P. Sabella, C. Teyssier, "Measurement of pattern recognition efficiency of tracks generated by ionizing radiation in a Medipix2 device", Nucl. Instr. Methods A, Vol. 633, Suppl. 1, p. S187-S189, doi:10.1016/j.nima.2010.06.163 (2011)

M. Martisikova, J. Jakůbek, C. Granja, B. Hartmann, L. Opalka, S. Pospíšil, O. Jaekel, "Measurement of secondary radiation during ion beam therapy with the pixel detector Timepix", JINST 6 (2011) C11014

Z. Vykydal, A. Fauler, M. Fiederle, J. Jakůbek, M. Švestková, A. Zwerger, "Medipix2 based CdTe microprobe for dental imaging", Journal of Instrumentation 6 C12002 doi:10.1088/1748-0221/6/12/C12002 (2011)

J. Dammer, F. Weyda, J. Benes, V. Sopko, J. Jakůbek, V. Vondracek, "Microradiography of biological samples with Timepix", JINST 6 C11005 doi:10.1088/1748-0221/6/11/C11005 (2011)

L. Pinsky, A. Empl, A. Gutierrez, J. Jakůbek, H. Kitamura, J. Miller, C. Leroy, N. Stoffle, S. Pospíšil, Y. Uchihori, N. Yasuda, C. Zeitlin, "Penetrating heavy ion charge and velocity discrimination with a TimePix-based Si detector (for space radiation applications)", Nucl. Instr. Methods A, Vol. 633, Suppl. 1, p. S190-S193, doi:10.1016/j.nima.2010.06.164 (2011)

D. Tureček, T. Holý, J. Jakůbek, S. Pospíšil, Z. Vykydal, "Pixelman: a multi-platform data acquisition and processing software package for Medipix2, Timepix and Medipix3 detectors ", Journal of Instrumentation 6 C01046, doi: 10.1088/1748-0221/6/01/C01046 (2011)

J. Jakůbek, "Precise Energy Calibration of Pixel Detector Working in Time-Over-Threshold Mode", Nucl. Instr. Methods A, Volume 633, Supplement 1, May 2011, Pages S262-S266, doi:10.1016/j.nima.2010.06.183

D. Vavřík, J. Dammer, J. Jakůbek, I. Jeon, O. Jiroušek, M. Kroupa, P. Zlámal, "Radiography in Engineering Practice", Nucl. Instr. Methods A, Vol. 633, Suppl. 1, p. S152-S155, doi:10.1016/j.nima.2010.06.152 (2011)

T. Doktor, O. Jiroušek, P. Zlámal, I. Jandejsek, "Real-time X-ray microradiographic imaging and image correlation for local strain mapping in single trabecula under mechanical load", JINST 6 C11007 doi:10.1088/1748-0221/6/11/C11007 (2011)

D. Tureček, T. Holý, S. Pospíšil, Z. Vykydal, "Remote control of ATLAS-MPX Network and Data Visualization", Nucl. Instr. and Meth. A, Volume 633, Supplement 1, Pages: S45-S47, doi: 10.1016/j.nima.2010.06.117 (2011)

J. Jakůbek, C. Granja, B. Hartmann, O. Jäkel, M. Martisikova, L. Opalka, S. Pospíšil, "Selective detection of secondary particles and neutrons produced in ion beam therapy with 3D sensitive voxel detector ", JINST 6 C12010, doi:10.1088/1748-0221/6/12/C12010 (2011)

F. Krejčí, J. Jakůbek, M. Kroupa, V. Jurka, K. Hruška, "Semiconductor pixel detector with absorption grid as a tool for charge sharing studies and energy resolution improvement", Journal of Instrumentation 6 C12034 (2011)

F. Krejčí, J. Jakůbek, M. Kroupa, "Single grating method for low dose 1-D and 2-D phase contrast X-ray imaging", Journal of Instrumentation 6 C01073 (2011)

U. Koester, C. Granja, J. Jakůbek, J. Uher, J. Vacík, "Slow-neutron-induced charged-particle emission-channeling-measurements with Medipix detectors", Nucl. Instr. Methods A 633 (2011) S267-S269

J. Dammer, F. Weyda, V. Sopko, J. Jakůbek, "The use of contrast agent for imaging biological samples", JINST 6 C01096, doi: 10.1088/1748-0221/6/01/C01096 (2011)

M. Weaver, J. Green, M. Petasecca, M. Lerch, D. Cutajar, D. Franklin, J. Jakůbek, M. Carolan, M. Conway, S. Pospíšil, T. Kron, P. Metcalfe, M. Zaider, A. Rosenfeld, "Three-dimensional dosimetry imaging of I-125 plaque for eye cancer treatment", Nucl. Instr. Methods A, Vol. 633, Suppl. 1, p. S276-S278, doi:10.1016/j.nima.2010.06.187 (2011)

Z. Vykydal, J. Jakůbek, "USB Lite-Miniaturized readout interface for Medipix2 detector", Nucl. Instr. and Meth. A, Volume 633, Supplement 1, Pages: S48-S49, doi: 10.1016/j.nima.2010.06.118 (2011)

J. Uher, G. Harvey, J. Jakůbek, "X-Ray Fluorescence Imaging With the Medipix2 Single-Photon Counting Detector", IEEE Transactions on Nuclear Science, Vol. PP, Issue: 99, doi: 10.1109/TNS.2011.2173352

F. Krejčí, J. Jakůbek, M. Kroupa, "X-ray Phase Contrast Imaging Using Single Absorption Coded Aperture", Nucl. Instr. Methods A 633, Suppl. 1, 181 - 184 (2011)

J. Žemlička, J. Jakůbek, M. Jakůbek, Z. Vykydal, "X-ray based methods for 3D characterization of charge collection and homogeneity of sensors with the use of Timepix chip", 2011 IEEE Nuclear Science Symposium Conference Record, Pages: 4711 - 4713, doi: 10.1109/NSSMIC.2011.6154764

J. Uher, J. Jakůbek, S. Mayo, A. Stevenson, J. Tickner, "X-ray beam hardening based material recognition in micro-imaging", JINST 6 P08015 doi:10.1088/1748-0221/6/08/P08015 (2011)

J. Jakůbek, C. Granja, O. Jäkel, M. Martisikova, S. Pospíšil, "Detection and Track Visualization of Primary and Secondary Radiation in Hadron Therapy Beams with the Pixel Detector Timepix", IEEE NSS/MIC Knoxville Conference Record, pages 1967-1969, doi: 10.1109/NSSMIC.2010.5874118

J. Jakůbek, J. Uher, "Fast Neutron Detector Based on TimePix Pixel Device with Micrometer Spatial Resolution", IEEE NSS/MIC Orlando, Conf. Record (2010)

J. Jakůbek, J. Uher, P. Soukup, "Fast Neutron Tracker based on 3D Position Sensitive Semiconductor Voxel Detector", IEEE NSS/MIC Knoxville Conf. Record, page 1162-1167, doi: 10.1109/NSSMIC.2010.5873950

M. Othman, D. Marinaro, M. Petasecca, S. Guatelli, D. Cutajar, M. Lerch, D. Prokopovich, M. Reinhard, J. Uher, J. Jakůbek, S. Pospíšil, A. Rosenfeld, "From imaging to dosimetry: GEANT4-based study on the application of Medipix to neutron dosimetry ", Radiation Measurements, Vol. 45, Issue 10, p. 1355-1358 (2010)

L. Pinsky, A. Empl, N. Stoffle, C. Leroy, A. Gutierrez, J. Jakůbek, S. Pospíšil, H. Kitamura, Y. Uchihori, Y. Nakahiro, J. Miller, C. Zeitlin, "Heavy Ion Charge and Velocity Resolution with a Medipix-Based Active Space Radiation Dosimeter", Aerospace Conference, 2010 IEEE, doi: 10.1109/AERO.2010.5447007

J. Uher, J. Jakůbek, "Monte-Carlo Simulation of Fast Neutron Detection with Timepix", IEEE NSS/MIC Orlando, Conf. Record (2010)

J. Uher, J. Jakůbek, "Monte-Carlo simulation of fast neutron detection using double-scatter events in plastic scintillator and Timepix", IEEE NSS/MIC Knoxville Conf. Record, page 1162-1167, doi: 10.1109/NSSMIC.2010.5873950

M. Othman, M. Petasecca, S. Guatelli, J. Uher, D. Marinaro, D. Prokopovich, M. Reinhard, M. Lerch, J. Jakůbek, S. Pospíšil, A. Rosenfeld, "Neutron Dosimeter Development based on Medipix2", IEEE Transactions on Nuclear Science 57 (6): 3456-3462 (2010)

M. Kroupa, J. Jakůbek, F. Krejčí, "Non-Contact Imaging with Enhanced Spatial Resolution by Secondary Electron Detection", IEEE NSS/MIC Knoxville Conf. Record, page 462-463, doi: 10.1109/NSSMIC.2010.5873803

O. Jiroušek, P. Zlámal, D. Kytýř, M. Kroupa, "Strain analysis of trabecular bone using time-resolved X-ray microtomography", NIM A (accepted) (2010)

J. Uher, G. Harvey, J. Jakůbek, "X-ray fluorescence imaging with the Medipix2 single-photon counting detector", IEEE NSS/MIC Knoxville Conf. Record, page 1067-1073, doi: 10.1109/NSSMIC.2010.5873930

J. Jakůbek, P. Schmidt-Wellenburg, P. Geltenbort, M. Platkevič, C. Plonka-Spehr, J. Šolc, T. Soldner, "A coated pixel device TimePix with micron spatial resolution for UCN detection", NIM A, Vol. 600, Issue 3, p. 651-656 (2009)

P. Frallicciardi, J. Jakůbek, D. Vavřík, "Comparison of Single Photon Counting and Charge-Integrating Detectors for X-ray High Resolution Imaging of Small Biological Objects", NIM A, Vol. 607, Issue 1, p. 221-222 (2009)

J. Jakůbek, "Energy Sensitive X-ray Radiography and Charge Sharing Effect in Pixelated Detector", NIM A, Vol. 607, Issue 1, p. 192-195 (2009)

J. Žemlička, J. Jakůbek, M. Kroupa, V. Tichy, "Energy and Position Sensitive Pixel Detector Timepix for X-Ray Fluorescence Imaging", NIM A, Vol. 607, Issue 1, p. 202-204 (2009)

F. Krejčí, J. Jakůbek, J. Dammer, D. Vavřík, "Enhancement of spatial resolution of roentgenographic methods", Nucl. Instr. Methods A 607, Issue 1, 208-211 (2009)

J. Jakůbek, A. Cejnarová, M. Platkevič, J. Šolc, Z. Vykydal, "Event by Event Energy Sensitive Imaging with TimePix Pixel Detector and its Application for Gamma Photon Tracking", 2008 IEEE Nuclear Science Symposium Conference Record, Pages: 2726-2733, doi: 10.1109/NSSMIC.2008.4775081 (2009)

Z. Vykydal, J. Jakůbek, M. Svestkova, "Micro-Probe for Medical Radiation Imaging Based on Medipix2 Detector", 2009 IEEE Nuclear Science Symposium Conference Record, Pages: 2795-2797, doi: 10.1109/NSSMIC.2009.5401659

J. Jakůbek, M. Platkevič, P. Schmidt-Wellenburg, P. Geltenbort, C. Plonka-Spehr, M. Daum, "Position-sensitive spectroscopy of ultra-cold neutrons with Timepix pixel detector", NIM A, Vol. 607, Issue 1, p. 45-47 (2009)

M. Platkevič, J. Jakůbek, Z. Vykydal, "RUIN – Rapid Universal Interface for Medipix Detector", 2008 IEEE Nuclear Science Symposium Conference Record, Pages: 2185-2187, doi: 10.1109/NSSMIC.2008.4774785 (2009)

D. Vavřík, J. Jakůbek, "Radiogram enhancement and linearization using the beam hardening correction method", NIM A, Vol. 607, Issue 1, p. 212-214 (2009)

J. Dammer, P. Frallicciardi, J. Jakůbek, M. Jakůbek, S. Pospíšil, E. Prenerová, D. Vavřík, L. Volter, F. Weyda, R. Zemek, "Real-time in-vivo µ-imaging with Medipix2", NIM A, Vol. 607, Issue 1, p. 205-207 (2009)

J. Jakůbek, "Semiconductor Pixel Detectors and their Applications in Life Sciences", 2009 JINST 4 P03013 doi:10.1088/1748-0221/4/03/P03013

Z. Vykydal, J. Bouchami, M. Campbell, Z. Doležal, M. Fiederle, D. Greiffenberg, A. Gutierrez, E. Heijne, T. Holý, J. Idarraga, J. Jakůbek, V. Král, M. Králík, C. Lebel, C. Leroy, X. Llopart, D. Maneuski, M. Nessi, V. O/'Shea, M. Platkevič, S. Pospíšil, M. Suk, L. Tlustos, P. Vichoudis, J. Visschers, I. Wilhelm, J. Žemlička, "The Medipix2-Based Network for Measurement of Spectral Characteristics and Composition of Radiation in ATLAS Detector", Nucl. Instr. and Meth. A, Volume 607, Issue 1, Pages: 35-37, doi: 10.1016/j.nima.2009.03.104

T. Michel, J. Durst, J. Jakůbek, "X-ray polarimetry by means od Compton scattering in the sensor of a hybrid photon counting detector", NIMA Vol. 603, Issue 3, p. 384-392 (2009)

V. Tichy, L. Švéda, J. Maršík, J. Jakůbek, V. Semencová, L. Pína, R. Hudec, M. Hromčík, "Capabilities of Medipix2 and Timepix Devices as Detectors for Lobster Eye X-Ray Optics", ICSO 2008 Conf. Proc.

M. Kroupa, J. Jakůbek, F. Krejčí, "Charge Collection Characterization with Semiconductor Pixel Detector Timepix", IEEE NSS/MIC/RTSD Conf. Proc. (2008) R12-37

J. Uher, J. Jakůbek, L. Celine, L. Claude, S. Pospíšil, R. Škoda, Z. Vykydal, "Detection of fast neutrons with the Medipix-2 pixel detector", Nucl. Instr. and Meth. A, Volume: 591, Issue:1, Pages: 71-74, doi: 10.1016/j.nima.2008.03.027

J. Jakůbek, J. Dammer, T. Holý, M. Platkevič, J. Uher, Z. Vykydal, "Digital radiography with pixel detectors of Medipix family", Československý Časopis pro Fyziku, 1/2008, 25-36

J. Jakůbek, T. Jenke, P. Geltenbort, M. Platkevič, C. Plonka-Spehr, P. Schmidt-Wellenburg, J. Šolc, T. Soldner, "Energy (TOF) and Position Sensitive Detection of Ultra Cold Neutrons with Micrometric Resolution Using the TimePix Pixel Detector", IEEE NSS/MIC Conf. Proc. (2008) N42-1

J. Jakůbek, "Energy sensitive micro-radiography and micro-tomography of biological samples allowing tissue type recognition with semiconductor pixel detectors of Medipix family", EPSM ABEC 2008, Conference handbook, ISBN 0 8582 5872 2, (p. 265)

F. Krejčí, J. Jakůbek, M. Kroupa, J. Dammer, D. Vavřík, "Enhancement of Spatial Resolution of Roentgenographic Methods Using Deconvolution", IEEE NSS/MIC Conf. Proc. (2008) M06-315

F. Krejčí, "Enhancement of spatial resolution of roentgenographic methods", MSc. Thesis, Faculty of Nuclear Sciences and Physical Engineering, CTU in Prague (2008)

J. Jakůbek, A. Cejnarová, M. Platkevič, M. Vobecký, "Image accumulation driven by external trigger signal", Československý Časopis pro Fyziku, 1/2008, 46-49

J. Jakůbek, "Imaging of small objects in different light (skill to see invisible)", Vesmír 87, p 437 (2008)

D. Vavřík, J. Jakůbek, "Material Analysis Using Characteristic Transmission Spectra", IEEE NSS/MIC Conf. Proc. (2008), N30-320

M. Platkevič, "Measuring with Medipix detector", Proceedings EMTECH 2008, ISBN 978-80-01-04198-7

D. Vavřík, I. Jandejsek, "Method of Interpolated Ellipses Based on Image Correlation Technique", Engineering Mechanics 2008, ISBN 978-80-87012-11-6, pp. 252-253

D. Vavřík, J. Jakůbek, "Micro-Radiographic Measurement of Material Damage Evolution", Conf. Proc. of New Methods of Damage and Failure Analysis of Structural Parts, ISBN 978-80-248-813-9, p. 331-337 (2008)

F. Minarik, "Microimaging of biological objects (Supervisor: J. Jakubek)", Master Thesis, FBMI CTU Prague (2008)

D. Vavřík, J. Jakůbek, T. Holý, "Micrometric scale measurement of material structure moving utilizing μ-radiographic technique", NIM A, Vol. 591, Issue 1, p. 24-27 (2008)

D. Vavřík, J. Jakůbek, T. Holý, "Microradiographic Observation of the Strain Field in Vicinity of the Crack Tip", 17th European Conference on Fracture, ISBN 978-80-214-3692-3, pp. 76-83 (2008)

D. Vavřík, T. Holý, J. Jakůbek, M. Jakůbek, J. Valach, "Microradiographic measurement of copper distribution in duralumin sample", Československý Časopis pro Fyziku, 1/2008, 58-61

D. Vavřík, J. Jakůbek, M. Jakůbek, T. Holý, "Microradiography in material science", Československý Časopis pro Fyziku, 1/2008, 53-57

J. Dammer, F. Weyda, "Microradiography of biologic objects using pixel detectors", Živa 6/2008, p 286-288

J. Dammer, J. Jakůbek, D. Vavřík, "Microradiography of biological samples", Československý Časopis pro Fyziku, 1/2008, 50-52

J. Šolc, J. Jakůbek, "Monte Carlo Simulations of a Multi-Layer Semiconductor Gamma Photon Tracker", IEEE NSS/MIC Conf. Proc. (2008) N30-306

J. Žemlička, Z. Vykydal, J. Jakůbek, T. Holý, "Network of Radiation Detectors for ATLAS", Proceedings of Workshop 2008, CTU in Prague, Volume: 12, Pages: 82-83, ISBN 978-80-01-04016-4

T. Holý, H. Erik, J. Jakůbek, S. Pospíšil, J. Uher, Z. Vykydal, "Pattern recognition of tracks induced by individual quanta of ionizing radiation in Medipix2 silicon detector", Nucl. Instr. and Meth. A, Volume: 591, Issue:1, Pages: 287-290, doi: 10.1016/j.nima.2008.03.074

J. Jakůbek, A. Cejnarová, T. Holý, S. Pospíšil, J. Uher, Z. Vykydal, "Pixel Detectors for Imaging with Heavy Charged Particles", Nucl. Instr. and Meth. A, Volume: 591, Issue:1, Pages: 155-158, doi: 10.1016/j.nima.2008.03.091

J. Jakůbek, A. Cejnarová, S. Pospíšil, J. Uher, "Position sensitive spectrometry with Timepix pixel detector", Československý Časopis pro Fyziku, 1/2008, 37-45

P. Skrabal, "Processes in biological microimaging (Supervisor: J. Jakubek) in progress", Master Thesis, Charles U. Prague (2008)

P. Frallicciardi, J. Dammer, F. Weyda, J. Jakůbek, D. Vavřík, S. Pospíšil, "Real-Time X-Ray 2-D and 3-D Micro-Imaging of Living Animals with Medipix2 Single Photon Counting Detector", Conf. Proc. IEEE NSS/MIC 2008, M10-112

J. Dammer, J. Jakůbek, R. Hanus, F. Weyda, D. Vavřík, "Real-time in-vivo imaging of small organisms", ICATPP congf. proceedings, p. 640-644 (2008)

M. Platkevič, V. Bočarov, J. Jakůbek, S. Pospíšil, V. Tichy, Z. Vykydal, "Signal processor controlled USB2.0 interface for Medipix2 detector", Nucl. Instr. and Meth. A, Volume: 591, Issue:1, Pages: 245-247, doi: 10.1016/j.nima.2008.03.065

J. Bouchami, A. Gutierrez, A. Houdayer, J. Idarraga, J. Jakůbek, C. Lebel, L. Claude, J. Martin, M. Platkevič, S. Pospíšil, "Study of the Charge Sharing in Silicon Pixel Detector with Heavy Ionizing Particles Interacting with a Medipix2 and a Timepix Device", IEEE NSS/MIC Conf. Proc. (2008) N04-2

Z. Vykydal, J. Visschers, D. Tezcan, K. De Munck, T. Borgers, W. Ruythooren, P. De Moor, "The RELAXd project: development of four-side tilable photon counting imagers", Nucl. Instr. and Meth. A, Volume: 591, Issue:1, Pages: 241-244, doi: 10.1016/j.nima.2008.03.099

V. Tichy, T. Holý, J. Jakůbek, V. Linhart, S. Pospíšil, Z. Vykydal, "X-Ray Fluorescence Imaging with Pixel Detectors", Nucl. Instr. and Meth. A, Volume: 591, Issue:1, Pages: 67-70, doi: 10.1016/j.nima.2008.03.122

J. Uher, J. Jakůbek, Z. Kohout, V. Linhart, S. Pospíšil, C. Fröjd, S. Petersson, C. Kenney, S. Parker, G. Thungstrom, "Characterization of 3D thermal neutron semiconductor detectors", NIM A 576 (2007) 32-37

M. Campbell, V. Havránek, H. Erik, T. Holý, J. Idarraga, J. Jakůbek, L. Celine, L. Claude, X. Llopart, J. Novotný, S. Pospíšil, L. Tlustos, Z. Vykydal, "Charge collection from proton and alpha particle tracks in silicon pixel detector devices", 2007 IEEE Nuclear Science Symposium Conference Record, Pages: 1047-1050, doi: 10.1109/NSSMIC.2007.4437190

J. Jakůbek, J. Dammer, C. Granja, T. Holý, S. Pospíšil, J. Uher, "Compact system for high resolution X-ray transmission radiography, in-line phase enhanced imaging and micro CT of biological samples", IEEE NSS IEEE NSS Conf. Proc. 4179187 (2007) 1077-1080

J. Jakůbek, "Data processing and image reconstruction methods for pixel detectors", NIM A 576 (2007) 223-234, doi:10.1016/j.nima.2007.01.157

I. Ndiaye, M. Vobecký, S. Pospíšil, J. Jakůbek, T. Holý, "Determination of Iridium Content by Coincidence Neutron Activation Analysis", Chem. Listy 101 (2007) 327-333

J. Uher, C. Fröjd, J. Jakůbek, S. Pospíšil, G. Thungstrom, Z. Vykydal, "Directional radiation detector", 2007 IEEE Nuclear Science Symposium Conference Record, Pages: 1162-1165, doi: 10.1109/NSSMIC.2007.4437213

J. Jakůbek, A. Cejnarová, M. Platkevič, M. Vobecký, "Image Accumulation in Pixel Detector Gated by Late External Trigger Signal and its Application in Imaging Activation Analysis", AIP Vol. 958 (2007), pp 131

J. Dammer, T. Holý, J. Jakůbek, M. Jakůbek, S. Pospíšil, D. Vavřík, "In-vivo real-time X-ray µ-imaging", AIP Vol. 958 (2007), pp 139

Z. Vykydal, T. Holý, J. Jakůbek, M. Platkevič, S. Pospíšil, "Medipix2/USB Portable Radiation Camera", Amer. Inst. of Physics (AIP) Conf. Proc., Volume: 958, Pages: 105-107, doi: 10.1063/1.2825757 (2007)

D. Vavřík, T. Holý, J. Jakůbek, M. Jakůbek, "Microadiographic Measurement of Moving Material Structures", Proceedings of International Symposium on Technology for Next Generation Vehicle & Machine (2007)

D. Vavřík, T. Holý, J. Jakůbek, M. Jakůbek, J. Valach, "Microradiographic Observation of Grainy Structure of Al Alloy", IEEE NSS Conf. Proc. (2007) N24-432

J. Jakůbek, A. Cejnarová, J. Dammer, T. Holý, M. Platkevič, S. Pospíšil, D. Vavřík, Z. Vykydal, "Microradiography with Semiconductor Pixel Detectors", Amer. Inst. of Physics (AIP) Conf. Proc., Volume: 958, Pages: 131-135, doi: 10.1063/1.2825764 (2007)

J. Jakůbek, C. Granja, J. Dammer, R. Tykva, R. Hanus, J. Uher, Z. Vykydal, "Phase contrast enhanced high resolution X-ray imaging and tomography of soft tissue", Nucl. Instr. and Meth. A, Volume: 571, Issue: 1-2, Pages: 69-72, doi: 10.1016/j.nima.2006.10.031 (2007)

C. Granja, J. Jakůbek, S. Pospíšil, Z. Vykydal, Y. Kopatch, S. Telezhnikov, "Position-sensitive spectroscopy of 252Cf fission fragments", Nucl. Instr. and Meth. A, Volume: 574, Issue: 3, Pages: 472-478, doi: 10.1016/j.nima.2007.01.164

D. Vavřík, J. Dammer, T. Holý, J. Jakůbek, M. Jakůbek, I. Jandejsek, "Radiography of Chaotically Moving Objects", AIP Vol. 958 (2007) 139-142

J. Uher, J. Jakůbek, T. Holý, S. Pospíšil, G. Thungstrom, D. Vavřík, Z. Vykydal, "Silicon Detectors for Neutron Imaging", Amer. Inst. of Physics (AIP) Conf. Proc., Volume: 958, Pages: 101-105, doi: 10.1063/1.2825756 (2007)

R. Hanus, J. Dammer, T. Holý, J. Jakůbek, S. Pospíšil, R. Tykva, "Small-scale in vivo imaging of soft tissues by radioscopy using single X-ray photon counting", Journal of Microscopy 226 (2007) 191–194

J. Jakůbek, J. Dammer, T. Holý, M. Jakůbek, S. Pospíšil, V. Tichy, J. Uher, D. Vavřík, "Spectrometric Properties of TimePix Pixel Detector for X-ray Color and Phase Sensitive Radiography", IEEE NSS Conf. Proc. (2007) N50-6

J. Jakůbek, J. Dammer, T. Holý, S. Pospíšil, J. Uher, "High Resolution Soft Tissue Tomographic Imaging using Single X-ray Photon Counting Pixel Device Medipix2", Conf.: New Technics in Lab Animal Science (2006)

J. Uher, "Highly sensitive Silicon Detectors of Thermal Neutrons (Supervisor:)", Ph.D. Thesis, CTU Prague (2006)

J. Uher, C. Fröjd, J. Jakůbek, C. Kenney, Z. Kohout, V. Linhart, S. Parker, S. Petersson, S. Pospíšil, G. Thungstrom, "Highly sensitive silicon detectors of thermal neutrons ", IEEE NSS 2006 Conf. Proc.

D. Vavřík, T. Holý, J. Jakůbek, M. Jakůbek, Z. Vykydal, "Microradiographic Observation of Material Damage Structure", 2006 IEEE Nuclear Science Symposium Conference Record, Pages: 1081-1083, doi: 10.1109/NSSMIC.2006.356034